nodiom

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SUMMARY

Address any node in your Markdown. A structured read/write engine for Markdown documents.

README.md

nodiom

Address any node in your Markdown.

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Markdown has structure. Every tool ignores it. Nodiom doesn't.


The Problem

When an AI agent or any program needs to modify a Markdown document, it loads the whole file as a string, uses fragile regex to find the right section, splices in new content, and hopes the formatting didn't break.

Nodiom solves this by treating Markdown as what it actually is: a tree. Every heading creates a branch, every list item is a node. You address them with path-like selectors — the same way you'd query a DOM node or a database row.


Quick Example

import { Nodiom } from '@synexiom-labs/nodiom';

const doc = await Nodiom.fromFile('./project-wiki.md');

// Read everything under a heading
const tasks = doc.read('# Project Alpha > ## Active Tasks');

// Add a new task
doc.append('# Project Alpha > ## Active Tasks', '- [ ] Deploy to staging');

// Remove a completed item
doc.delete('# Project Alpha > ## Completed > li[0]');

// Save back to disk
await doc.save();

Install

npm install @synexiom-labs/nodiom

Requirements: Node.js 18+


Core Concepts: Selectors

A selector is a " > "-separated path of segments, each matching a node in the document's structure.

Heading segments

"# Project Alpha"              → The H1 "Project Alpha" and all its content
"## Tasks"                     → Any top-level H2 named "Tasks"
"# Project Alpha > ## Tasks"   → The H2 "Tasks" nested under H1 "Project Alpha"

The depth of the # characters must match the heading depth in the document.

Element segments

"## Tasks > li[0]"     → First list item under ## Tasks
"## Tasks > li[-1]"    → Last list item (negative indexing)
"## Notes > p[0]"      → First paragraph under ## Notes
"## Arch > table[0]"   → First table under ## Architecture
"## Arch > code[0]"    → First code block under ## Architecture

Valid element types: p, li, code, blockquote, table, hr

Content segments

An index is a position, not an identity. If another writer appends to the same
section between the moment you compute li[2] and the moment you write to it,
that index now points at a different node — and the write lands on the wrong
one, silently.

Address by content instead whenever more than one writer touches a document:

'## In Progress > li[contains="c_7f3a"]'   → The list item whose text contains "c_7f3a"
"## Notes > p[contains='TODO']"            → The paragraph containing "TODO"

The substring is matched against the node's own source text, and must match
exactly one node in scope. Matching several throws AmbiguousSelectorError
rather than picking the first — silently editing one of several candidates is
the failure this exists to prevent.

import { AmbiguousSelectorError } from '@synexiom-labs/nodiom';

try {
  doc.delete('## In Progress > li[contains="c_7f3a"]');
} catch (e) {
  if (e instanceof AmbiguousSelectorError) {
    // Use a longer or more distinctive substring.
  }
}

Heading scope semantics

"Content under ## Tasks" means all nodes that appear after the ## Tasks heading until the next heading of equal or lesser depth. This matches how you naturally read a Markdown document.


API Reference

Initialization

// From a file
const doc = await Nodiom.fromFile('./wiki.md');

// From a file with advisory locking (for concurrent access)
const doc = await Nodiom.fromFile('./wiki.md', { lock: true, lockTimeout: 5000 });

// From a string (no filesystem — safe for serverless)
const doc = Nodiom.fromString(markdownContent);

Reading

// Returns the Markdown string of everything under the selector
const content: string = doc.read('# Project > ## Summary');

// Returns an array of list item strings
const items: string[] = doc.readList('# Project > ## Tasks');

// Returns metadata about the location
const info = doc.query('# Project > ## Tasks');
// { exists: true, type: 'heading', depth: 2, childCount: 7, index: 3 }

// Returns the structural outline of the document
const outline = doc.tree();
// [{ heading: 'Project', depth: 1, children: [{ heading: 'Tasks', depth: 2, children: [] }] }]

Mutating

All mutation methods return this, so they can be chained.

// Replace all content within a section (heading is preserved)
doc.write('# Project > ## Summary', 'The project is on track for Q3.');

// Append content after the last item in a section
doc.append('# Project > ## Tasks', '- [ ] Final review');

// Remove a node
doc.delete('# Project > ## Completed > li[0]');

// Chaining
doc
  .append('# Project > ## Tasks', '- [ ] Task A')
  .append('# Project > ## Tasks', '- [ ] Task B')
  .delete('# Project > ## Completed > li[-1]');

Serialization & File I/O

// Get the current document as a Markdown string
const output: string = doc.toString();

// Write back to the original file (releases lock if held)
await doc.save();

// Write to a new file
await doc.saveAs('./output.md');

// Explicitly release a lock
await doc.unlock();

Error Handling

import { SelectorNotFoundError, SelectorParseError, LockError } from '@synexiom-labs/nodiom';

try {
  doc.read('# Project > ## Taks'); // typo
} catch (e) {
  if (e instanceof SelectorNotFoundError) {
    console.log(e.selector);     // "# Project > ## Taks"
    console.log(e.suggestions);  // ["Tasks"] — fuzzy match
  }
}

AI Agent Example

A LangChain-style agent maintaining a project wiki:

import { Nodiom } from '@synexiom-labs/nodiom';

async function agentUpdateWiki(wikiPath: string, taskDescription: string) {
  // Load with lock — safe for concurrent agent access on the same machine
  const doc = await Nodiom.fromFile(wikiPath, { lock: true });

  // Add a new active task
  doc.append('## Tasks > ### Active', `- [ ] ${taskDescription}`);

  // Log the current task count
  const activeTasks = doc.readList('## Tasks > ### Active');
  console.log(`Active tasks: ${activeTasks.length}`);

  // Save and release the lock
  await doc.save();
}

Concurrency

Nodiom includes advisory file locking via proper-lockfile.

const doc = await Nodiom.fromFile('./shared-wiki.md', { lock: true });
// Other Nodiom processes trying to lock this file will wait or throw LockError

doc.append('## Log', `- ${new Date().toISOString()} Agent B completed task`);
await doc.save(); // writes and releases the lock

Scope of the concurrency guarantee: Advisory locking prevents corruption from multiple Node.js processes on the same machine. For distributed multi-agent environments (multiple machines or serverless functions), use Nodiom Cloud (coming soon) which provides true distributed concurrency with structural merge semantics.


Comparison

Approach Structured reads? Structural writes? Roundtrip fidelity Serverless Concurrent
fs.readFile + regex No Fragile Depends on regex No No
gray-matter Frontmatter only Frontmatter only Yes Yes No
Databases No No No (loses Markdown) Yes Yes
Vector DBs Semantic only No No Yes Yes
Nodiom Yes Yes Yes Yes Single-machine

Roadmap

  • v0.2.0insert() with positional control (before / after a sibling), diff() structural diffing, glob selectors (## *Tasks*)
  • v0.3.0 — LangChain tool wrapper
  • v1.0.0 — Stable selector syntax, production-ready API
  • Nodiom Cloud — Hosted HTTP API for serverless and distributed multi-agent use. No local setup required. Join the waitlist →

Contributing

Contributions welcome. Please open an issue before submitting a PR for non-trivial changes.

git clone https://github.com/synexiom-labs/nodiom
cd nodiom
npm install
npm test

License

MIT — Synexiom Labs Inc.

Born from the state layer powering Cortexiom's reasoning architecture.

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