claude-code-kit

mcp
Guvenlik Denetimi
Basarisiz
Health Uyari
  • No license — Repository has no license file
  • Description — Repository has a description
  • Active repo — Last push 0 days ago
  • Community trust — 11 GitHub stars
Code Basarisiz
  • process.env — Environment variable access in hooks/notification/notify-permission.js
  • fs module — File system access in hooks/notification/notify-permission.js
  • network request — Outbound network request in hooks/notification/notify-permission.js
  • child_process — Shell command execution capability in hooks/post-tool-use/auto-stage.js
  • execSync — Synchronous shell command execution in hooks/post-tool-use/auto-stage.js
  • process.env — Environment variable access in hooks/post-tool-use/auto-stage.js
  • fs module — File system access in hooks/post-tool-use/auto-stage.js
  • rm -rf — Recursive force deletion command in hooks/pre-tool-use/block-dangerous-commands.js
  • process.env — Environment variable access in hooks/pre-tool-use/block-dangerous-commands.js
  • fs module — File system access in hooks/pre-tool-use/block-dangerous-commands.js
  • process.env — Environment variable access in hooks/pre-tool-use/protect-secrets.js
  • fs module — File system access in hooks/pre-tool-use/protect-secrets.js
  • exec() — Shell command execution in skills/algorithmic-art/templates/generator_template.js
Permissions Gecti
  • Permissions — No dangerous permissions requested

Bu listing icin henuz AI raporu yok.

SUMMARY

A curated collection of agents, skills, and settings that supercharge Claude Code. Drop them into their local Claude Code environment and immediately boost productivity.

README.md

Claude Code Kit

A curated collection of agents, skills, and settings that supercharge Claude Code. The goal of this kit is to gather battle-tested subagents, reusable skills, and sensible default settings in one place so practitioners can drop them into their local Claude Code environment and immediately boost productivity.

🚀 What's Inside

Component Count Location Installs to
Agents 133 specialized subagents agents/ ~/.claude/agents/
Skills 197 reusable skills skills/ ~/.claude/skills/
Settings Global config + permissions settings/ ~/.claude/
Hooks 4 automation hooks hooks/ ~/.claude/hooks/
  • Agents are role-focused subagents (language experts, reviewers, architects, etc.) that Claude Code can delegate work to.
  • Skills are self-contained capability packages (each with a SKILL.md) that teach Claude how to use a specific tool, library, or workflow.
  • Settings provide a ready-to-use settings.json with environment tuning, permission guardrails, and a status line.

🔧 Installation (user-level / global)

These steps install everything at the user level so the agents, skills, and settings are available across all your projects (Claude Code reads from ~/.claude/ on Linux/macOS and %USERPROFILE%\.claude\ on Windows).

Run the commands from the root of this repository.


Linux / macOS

Dependencies: node ≥ 18 (for hooks) and jq (for the status line). Both are optional if you skip hooks or the status line.

# Debian/Ubuntu
sudo apt install nodejs jq

# macOS
brew install node jq
# 1. Create the target directories if they don't exist
mkdir -p ~/.claude/agents ~/.claude/skills ~/.claude/hooks/pre-tool-use ~/.claude/hooks/post-tool-use ~/.claude/hooks/notification

# 2. Copy all agents
cp -v agents/*.md ~/.claude/agents/

# 3. Copy all skills (each skill is its own directory)
cp -rv skills/* ~/.claude/skills/

# 4. Copy hooks
cp -v hooks/pre-tool-use/*.js ~/.claude/hooks/pre-tool-use/
cp -v hooks/post-tool-use/*.js ~/.claude/hooks/post-tool-use/
cp -v hooks/notification/*.js  ~/.claude/hooks/notification/

# 5. Copy the status line script and make it executable
cp settings/statusline.sh ~/.claude/statusline.sh
chmod +x ~/.claude/statusline.sh

# 6. Copy the platform settings (already points to ~/.claude/statusline.sh)
cp -v settings/settings-bash.json ~/.claude/settings.json

Re-syncing / updates (recommended)

rsync is idempotent — re-run it anytime to pick up updates without clobbering unrelated files:

rsync -av agents/  ~/.claude/agents/
rsync -av skills/  ~/.claude/skills/
rsync -av hooks/   ~/.claude/hooks/
cp settings/statusline.sh ~/.claude/statusline.sh && chmod +x ~/.claude/statusline.sh
rsync -av settings/settings-bash.json ~/.claude/settings.json

Requires jq (brew install jq / apt install jq). git is optional — the script degrades gracefully when not in a repo.


Windows (PowerShell)

Dependencies: node ≥ 18 (for hooks). Install via nodejs.org or:

winget install OpenJS.NodeJS
# 1. Create the target directories if they don't exist
New-Item -ItemType Directory -Force `
  "$env:USERPROFILE\.claude\agents", `
  "$env:USERPROFILE\.claude\skills", `
  "$env:USERPROFILE\.claude\hooks\pre-tool-use", `
  "$env:USERPROFILE\.claude\hooks\post-tool-use", `
  "$env:USERPROFILE\.claude\hooks\notification"

# 2. Copy all agents
Copy-Item agents\*.md "$env:USERPROFILE\.claude\agents\"

# 3. Copy all skills (each skill is its own directory)
Copy-Item skills\* "$env:USERPROFILE\.claude\skills\" -Recurse

# 4. Copy hooks
Copy-Item hooks\pre-tool-use\*.js "$env:USERPROFILE\.claude\hooks\pre-tool-use\"
Copy-Item hooks\post-tool-use\*.js "$env:USERPROFILE\.claude\hooks\post-tool-use\"
Copy-Item hooks\notification\*.js  "$env:USERPROFILE\.claude\hooks\notification\"

# 5. Copy the status line script
Copy-Item settings\statusline.ps1 "$env:USERPROFILE\.claude\statusline.ps1"

# 6. Copy the platform settings and inject your username into path placeholders
$settings = Get-Content settings\settings-powershell.json -Raw
$settings = $settings -replace '<YourName>', $env:USERNAME
$settings | Set-Content "$env:USERPROFILE\.claude\settings.json" -Encoding utf8

Re-syncing / updates (recommended)

robocopy is the Windows equivalent of rsync — safe to re-run, only copies changed files:

robocopy agents  "$env:USERPROFILE\.claude\agents"  *.md /NFL /NDL
robocopy skills  "$env:USERPROFILE\.claude\skills"  /E   /NFL /NDL
robocopy hooks   "$env:USERPROFILE\.claude\hooks"   /E   /NFL /NDL
Copy-Item settings\statusline.ps1 "$env:USERPROFILE\.claude\statusline.ps1" -Force
$settings = Get-Content settings\settings-powershell.json -Raw
$settings = $settings -replace '<YourName>', $env:USERNAME
$settings | Set-Content "$env:USERPROFILE\.claude\settings.json" -Encoding utf8

If you have PowerShell 7 installed, open ~/.claude/settings.json after install and swap powershell for pwsh in the statusLine.command value. Windows Terminal is recommended for correct ANSI / UTF-8 rendering. No jq required — the script uses PowerShell's native JSON parser.


Heads up — settings. Copying settings.json overwrites your existing global Claude Code settings. If you already have a customized file, back it up first:

  • Linux/macOS: cp ~/.claude/settings.json ~/.claude/settings.json.bak
  • Windows: Copy-Item "$env:USERPROFILE\.claude\settings.json" "$env:USERPROFILE\.claude\settings.json.bak"

Then merge by hand instead of overwriting.

Note. The agents/ folder also contains a CLAUDE.md and an AGENTS-REFERENCE.md. These are reference/instruction docs, not agents — you can skip copying them, or copy them deliberately if you want their guidance.

After installing, restart Claude Code (or start a new session). The agents become available for delegation, and skills trigger automatically based on their descriptions.


🤖 Agents

133 subagents grouped by domain. Each links to its definition file.

Meta / Orchestration

Agent Description
grand-architect Meta-orchestrator that plans complex features, breaks down large tasks, and coordinates multiple agents.
tech-lead-orchestrator Senior tech lead that analyzes projects and returns structured task breakdowns for agent coordination.
project-analyst Analyzes unfamiliar codebases to detect frameworks, tech stacks, and architecture for routing.
code-archaeologist Explores and documents unfamiliar, legacy, or complex codebases with full risk/action reports.

Languages & Runtimes

Agent Description
python-pro Type-safe, production-ready Python with modern async patterns and extensive typing.
typescript-pro Advanced TypeScript type system, full-stack development, and build optimization.
javascript-pro Modern ES2023+ JavaScript for browser, Node.js, and full-stack apps.
golang-pro Idiomatic Go for concurrent, high-performance, cloud-native systems.
rust-engineer Rust systems programming with memory safety and zero-cost abstractions.
cpp-pro High-performance modern C++20/23 and template metaprogramming.
java-pro Modern Java 21+ with virtual threads, pattern matching, and Spring Boot 3.x.
java-architect Enterprise Java architecture across the Spring ecosystem and microservices.
csharp-developer ASP.NET Core APIs and cloud-native .NET with clean architecture.
dotnet-core-expert Cloud-native .NET Core microservices with minimal APIs.
dotnet-framework-4.8-expert Legacy .NET Framework 4.8 maintenance and modernization.
php-pro Modern PHP 8.3+ with strong typing and enterprise frameworks.
kotlin-specialist Kotlin coroutines, multiplatform, and Android development.
swift-expert Native iOS/macOS/server-side Swift with advanced concurrency.
elixir-expert Fault-tolerant concurrent systems with OTP and Phoenix.
sql-pro Complex SQL query optimization and schema design across major engines.

Frameworks (Frontend / Backend / Mobile)

Agent Description
react-specialist React 18+ patterns, performance optimization, and server components.
react-coder Simplicity-first React 19 components using internal UI packages.
vue-expert Vue 3 Composition API, reactivity, and Nuxt 3 development.
angular-architect Enterprise Angular 15+ with complex state and micro-frontends.
nextjs-developer Production Next.js 14+ with App Router and server components.
frontend-developer Robust, scalable React frontend components and UX.
fullstack-developer End-to-end feature delivery from database to UI.
backend-developer Scalable API development and microservices.
django-developer Django 4+ apps and REST APIs with async views.
rails-expert Rails apps with Hotwire reactivity and idiomatic patterns.
laravel-specialist Laravel 10+ with Eloquent, queues, and enterprise features.
laravel-backend-expert Laravel backend controllers, services, and Eloquent models.
laravel-eloquent-expert Laravel Eloquent schemas, relationships, and query tuning.
spring-boot-engineer Enterprise Spring Boot 3+ microservices and reactive patterns.
wordpress-master WordPress themes, plugins, headless APIs, and scaling.
mobile-developer Cross-platform mobile with React Native and Flutter.
mobile-app-developer Native and cross-platform iOS/Android development.
flutter-expert Cross-platform Flutter 3+ with custom UI and state management.
electron-pro Electron desktop apps with native OS integration and distribution.
cli-developer Command-line tools with intuitive design and cross-platform support.

Architecture & API Design

Agent Description
architect-reviewer System design validation, architectural patterns, and scalability analysis.
api-designer Scalable, developer-friendly REST and GraphQL API design.
graphql-architect GraphQL schema design, federation, and query performance.
microservices-architect Distributed microservice ecosystems and communication patterns.
websocket-engineer Scalable real-time WebSocket architectures and low-latency messaging.
database-architect Data layer design, technology selection, and schema modeling.

Data & Databases

Agent Description
database-administrator High-availability DBs, performance tuning, and disaster recovery.
database-optimizer Query optimization, indexing, caching, and partitioning.
postgres-pro PostgreSQL performance, replication, and advanced features.
data-engineer Scalable data pipelines, ETL/ELT, and data infrastructure.
data-analyst Business data insights, dashboards, and statistical analysis.
data-scientist Statistical analysis, ML, and data storytelling.
data-researcher Discover, collect, and validate data from multiple sources.

AI / ML

Agent Description
ai-engineer AI system design, model implementation, and production deployment.
ml-engineer Production ML training pipelines, serving, and retraining.
machine-learning-engineer Model deployment, serving infrastructure, and edge inference.
mlops-engineer ML infrastructure, CI/CD, versioning, and experiment tracking.
llm-architect Production LLM systems, fine-tuning, RAG, and inference serving.
nlp-engineer NLP/NLU/NLG with transformer models and production pipelines.
prompt-engineer Design, optimize, and evaluate prompts for production LLMs.
mcp-developer Model Context Protocol server and client development.

Infrastructure / DevOps / Cloud

Agent Description
cloud-architect Multi-cloud (AWS/Azure/GCP) IaC, FinOps, and architecture.
devops-engineer CI/CD, containerization, monitoring, and automation.
deployment-engineer CI/CD pipelines and zero-downtime deployment strategies.
platform-engineer Internal developer platforms, golden paths, and self-service.
kubernetes-architect Cloud-native K8s, GitOps, service mesh, and multi-tenancy.
kubernetes-specialist Production-grade K8s deployments and cluster management.
docker-expert Container image building, optimization, and orchestration.
terraform-engineer Multi-cloud Terraform IaC and state management.
terragrunt-expert Terragrunt orchestration and DRY multi-environment IaC.
azure-infra-engineer Azure infrastructure, Entra ID, Bicep, and PowerShell automation.
network-engineer Cloud/hybrid network design, security, and troubleshooting.
cost-optimizer Cloud cost analysis, resource optimization, and scaling plans.
windows-infra-admin Windows Server, Active Directory, DNS, DHCP, and Group Policy.
iot-engineer Connected device architectures, edge computing, and IoT platforms.

PowerShell / Windows Automation

Agent Description
powershell-5.1-expert PowerShell 5.1 Windows automation with RSAT modules.
powershell-7-expert Cross-platform PowerShell 7+ cloud automation and CI/CD.
powershell-module-architect PowerShell module architecture and reusable automation libraries.
powershell-security-hardening Hardening PowerShell automation and remoting security.
powershell-ui-architect WinForms/WPF/TUI interfaces for PowerShell tools.

Reliability / Operations / Incident Response

Agent Description
sre-engineer SLOs, automation, and resilient self-healing systems.
observability-engineer Monitoring, logging, tracing, and SLI/SLO management.
incident-responder Active security breach and outage response and recovery.
devops-incident-responder Production incident diagnosis and postmortems.
chaos-engineer Controlled failure experiments and resilience validation.
error-detective Diagnose errors, correlate across services, and find root causes.
debugger Diagnose and fix bugs from error logs and stack traces.

Security

Agent Description
security-engineer DevSecOps, cloud security, and zero-trust architecture.
security-auditor Security assessments, compliance validation, and risk management.
security-specialist Mobile (RN/Expo) security audits and OWASP Mobile Top 10.
penetration-tester Authorized offensive testing and vulnerability exploitation.
ad-security-reviewer Active Directory security posture and privilege escalation audit.
compliance-auditor GDPR, HIPAA, PCI DSS, SOC 2, and ISO compliance.

Quality / Review / Testing

Agent Description
code-reviewer Code quality, security, and best-practice review across languages.
senior-code-reviewer Comprehensive senior-level fullstack code review.
qa-expert Test strategy, manual/automated testing, and quality metrics.
test-automator Automated test frameworks and CI/CD test integration.
test-generator Smart test generation for RN/Expo with ROI prioritization.
refactoring-specialist Transform complex/duplicated code while preserving behavior.
legacy-modernizer Incremental legacy migration and technical-debt reduction.
dependency-manager Dependency auditing, conflict resolution, and bundle optimization.

Performance & Build

Agent Description
performance-engineer System optimization, profiling, and scalability engineering.
performance-optimizer Bottleneck identification and workload optimization.
performance-enforcer Bundle size and performance budget tracking for RN/Expo.
performance-prophet Predictive performance analysis for RN/Expo before deployment.
build-engineer Build performance optimization and faster compilation.
dx-optimizer Developer workflow, feedback loops, and DX metrics.
tooling-engineer Developer tools, CLIs, code generators, and IDE extensions.
git-workflow-manager Git workflows, branching strategies, and merge management.

UI / UX / Accessibility / Design

Agent Description
ui-designer Visual interfaces, design systems, and component libraries.
ux-researcher User research, usability testing, and persona development.
accessibility-tester WCAG compliance and assistive-technology testing.
a11y-enforcer WCAG 2.2 accessibility enforcement for RN/Expo apps.
design-token-guardian Detect hardcoded styles and enforce design tokens in RN/Expo.

Documentation

Agent Description
documentation-engineer Documentation-as-code systems and automated generation.
documentation-specialist READMEs, API specs, architecture guides, and user manuals.
technical-writer API references, user guides, and SDK documentation.

Specialized Engineering

Agent Description
fintech-engineer Financial systems, payments, and regulatory compliance.
slack-expert Slack apps, API integrations, and bot security review.

Product / Business / Research

Agent Description
product-manager Product strategy, feature prioritization, and roadmaps.
project-manager Project plans, risk management, and stakeholder coordination.
scrum-master Agile facilitation, ceremonies, and velocity improvement.
business-analyst Business process analysis and requirements gathering.
customer-success-manager Customer health, retention, and lifetime value.
sales-engineer Technical pre-sales, solution architecture, and POCs.
content-marketer SEO content strategy and multi-channel campaigns.
legal-advisor Contracts, compliance, IP strategy, and legal risk.
market-researcher Market analysis, consumer behavior, and opportunity sizing.
competitive-analyst Competitor analysis and competitive positioning.
research-analyst Multi-source research synthesis and trend identification.
trend-analyst Emerging patterns, industry shifts, and future scenarios.
search-specialist Advanced search strategies and targeted information retrieval.
scientific-literature-researcher Evidence-grounded answers from full-text research papers.

🧩 Skills

197 skills, each packaged as a directory containing a SKILL.md (and supporting scripts/templates). Skills trigger automatically based on their descriptions. Grouped below by domain.

Token Efficiency / Caveman
Skill Description
caveman Ultra-compressed communication mode (~75% token reduction). Lite / full / ultra / wenyan variants. Trigger: /caveman.
caveman-commit Terse Conventional Commits messages. ≤50-char subject, body only when "why" isn't obvious. Trigger: /caveman-commit.
caveman-compress Compress .md memory files to caveman prose (~46% input-token savings). Backs up originals. Trigger: /caveman-compress <file>.
caveman-help Quick-reference card for all caveman modes, skills, and commands. One-shot display. Trigger: /caveman-help.
caveman-review Ultra-compressed PR review: one line per finding — location, problem, fix. Trigger: /caveman-review.
caveman-stats Show real token usage and estimated savings for the current session via hook. Trigger: /caveman-stats.
cavecrew Decision guide for delegating to caveman-style subagents (~60% smaller tool results vs vanilla agents).
Claude Code Workflow & Engineering Practice
Skill Description
brainstorming Explore intent, requirements, and design before any creative/build work.
writing-plans Turn a spec into a multi-step implementation plan before coding.
executing-plans Execute a written plan in a separate session with review checkpoints.
subagent-driven-development Execute plans with independent tasks in the current session.
dispatching-parallel-agents Handle 2+ independent tasks with no shared state in parallel.
test-driven-development TDD before writing implementation code for features/bugfixes.
systematic-debugging Structured debugging before proposing fixes.
verification-before-completion Require verification commands before claiming work is done.
requesting-code-review Verify work meets requirements before merging.
receiving-code-review Rigorously evaluate review feedback before implementing.
finishing-a-development-branch Decide how to integrate completed work (merge/PR/cleanup).
using-git-worktrees Create isolated workspaces via git worktrees.
using-superpowers Establish how to find and use skills at conversation start.
writing-skills Create, edit, and verify skills before deployment.
skill-creator Create, improve, eval, and benchmark skills.
autoskill Observe workflows via screenpipe and draft new skills.
pi-agent Build with and use the Pi minimal terminal coding harness.
mcp-builder Build high-quality MCP servers (Python FastMCP / TS SDK).
claude-api Reference for the Claude API / Anthropic SDK: model IDs, pricing, params, streaming, tool use.
Expo / React Native Development
Skill Description
building-native-ui Build apps with Expo Router: styling, navigation, animations.
native-data-fetching Network requests, React Query/SWR, caching, and offline support.
add-app-clip Add an iOS App Clip target to an Expo app.
expo-api-routes Create API routes in Expo Router with EAS Hosting.
expo-brownfield Integrate Expo/React Native into existing native apps.
expo-cicd-workflows Author EAS workflow YAML for build/deploy pipelines.
expo-deployment Deploy Expo apps to App Store, Play Store, and web.
expo-dev-client Build and distribute Expo development clients.
expo-module Build Expo native modules/views (Swift, Kotlin, TS).
expo-observe Add and query EAS Observe performance metrics.
expo-tailwind-setup Set up Tailwind v4 / NativeWind v5 in Expo.
expo-ui-jetpack-compose Use Jetpack Compose views via @expo/ui.
expo-ui-swift-ui Use SwiftUI views via @expo/ui.
eas-update-insights Check EAS Update health: crash rates, installs, payload size.
upgrading-expo Upgrade Expo SDK versions and fix dependency issues.
use-dom Run web code in a webview via Expo DOM components.
Web / Frontend / Design
Skill Description
frontend-design Distinctive, intentional visual design for new/existing UI.
web-artifacts-builder Build complex multi-component HTML artifacts (React/Tailwind/shadcn).
web-asset-generator Generate favicons, app icons (PWA), and Open Graph images.
canvas-design Create visual art in PNG/PDF using design philosophy.
algorithmic-art Generative/algorithmic art with p5.js.
theme-factory Style artifacts (slides, docs, HTML) with preset/custom themes.
brand-guidelines Apply Anthropic brand colors and typography to artifacts.
generate-image Generate/edit images with AI (FLUX, Nano Banana 2).
infographics Create professional infographics with AI and iterative refinement.
slack-gif-creator Create animated GIFs optimized for Slack.
playwright-test-automation Browser automation and testing with Playwright.
webapp-testing Test/debug local web apps with Playwright.
Documents, Office & Publishing
Skill Description
docx Create, read, and edit Word (.docx) documents.
pptx Create, read, and edit PowerPoint (.pptx) presentations.
xlsx Open, read, edit, and create spreadsheets (.xlsx/.csv/.tsv).
pdf Read, merge, split, fill, OCR, and create PDF files.
markitdown Convert office/media files to Markdown.
liteparse Local PDF/DOC parsing with bounding boxes and OCR for RAG.
doc-coauthoring Structured workflow for co-authoring documentation.
markdown-mermaid-writing Markdown + Mermaid diagram writing standards.
slides-generator Build animation-rich HTML presentations (or convert PPT).
internal-comms Write internal communications (status reports, updates, FAQs).
Research, Search & Reasoning
Skill Description
research-lookup Look up current research via parallel-cli / Parallel Chat / Perplexity.
paper-lookup Search 10 academic paper databases via REST APIs.
database-lookup Search 78 public scientific/biomedical/economic database APIs.
literature-review Systematic literature reviews across academic databases.
citation-management Search, validate, and format citations / BibTeX.
pyzotero Manage Zotero reference libraries via the Web API.
exa-search Web/scholarly search and URL extraction via Exa.
parallel-web Web search, extraction, enrichment, and deep research via parallel-cli.
bgpt-paper-search Search papers with structured experimental data via BGPT MCP.
open-notebook Self-hosted NotebookLM alternative for research/document analysis.
paperzilla Project/paper recommendations and summaries in Paperzilla.
scholar-evaluation Evaluate scholarly work with the ScholarEval framework.
peer-review Structured, checklist-based manuscript/grant review.
scientific-critical-thinking Evaluate scientific claims and evidence quality.
scientific-brainstorming Creative research ideation and interdisciplinary exploration.
hypothesis-generation Formulate testable hypotheses from observations.
hypogenic Automated LLM-driven hypothesis generation/testing on data.
consciousness-council Multi-perspective "Mind Council" deliberation on decisions.
what-if-oracle Structured What-If scenario branch analysis.
dhdna-profiler Extract cognitive/thinking patterns from text.
Scientific Writing & Publishing
Skill Description
scientific-writing Write scientific manuscripts in IMRAD prose with citations.
scientific-slides Build research talk decks (PowerPoint / Beamer).
scientific-schematics Publication-quality scientific diagrams via AI.
scientific-visualization Publication-ready multi-panel figures with journal styling.
latex-posters Research posters in LaTeX (beamerposter/tikzposter/baposter).
pptx-posters Research posters in HTML/CSS exported to PDF/PPTX.
venue-templates LaTeX templates for journals, conferences, posters, grants.
research-grants Write competitive NSF/NIH/DOE/DARPA/NSTC proposals.
market-research-reports Consulting-style market research reports (50+ pages).
Data Science, Stats & Visualization
Skill Description
exploratory-data-analysis EDA across 200+ scientific file formats with reports.
statistical-analysis Guided test selection, assumptions, and APA reporting.
statsmodels Statistical models (OLS, GLM, mixed, ARIMA) with diagnostics.
scikit-learn Supervised/unsupervised ML, pipelines, and tuning.
shap Model interpretability/explainability with SHAP.
umap-learn Nonlinear dimensionality reduction and embeddings.
matplotlib Low-level fully customizable plotting.
seaborn Statistical visualization with pandas integration.
polars High-performance DataFrame ETL/analytics.
dask Distributed/larger-than-RAM pandas/NumPy workflows.
vaex Out-of-core DataFrames for billions of rows.
networkx Create, analyze, and visualize graphs/networks.
sympy Exact symbolic math (algebra, calculus, solving).
matlab MATLAB/Octave numerical computing and visualization.
pymc Bayesian modeling and MCMC/variational inference.
pymoo Multi-objective optimization (NSGA-II/III, MOEA/D).
simpy Process-based discrete-event simulation.
aeon Time series ML (classification, forecasting, clustering).
timesfm-forecasting Zero-shot time series forecasting with TimesFM.
scikit-survival Survival analysis and time-to-event modeling.
usfiscaldata Query the U.S. Treasury Fiscal Data REST API.
get-available-resources Detect CPU/GPU/memory/disk and recommend a compute strategy.
Deep Learning, RL & GPU
Skill Description
transformers Hugging Face Transformers inference and fine-tuning.
pytorch-lightning Organize PyTorch with Lightning for scalable training.
torch-geometric Graph neural networks with PyTorch Geometric.
stable-baselines3 Standard RL algorithms with a scikit-learn-like API.
pufferlib High-performance parallel/multi-agent RL.
optimize-for-gpu GPU-accelerate Python (CuPy, Numba, cuDF, cuML, etc.).
modal Serverless cloud GPU compute with the Modal SDK.
hugging-science Discover scientific datasets/models/Spaces on Hugging Face.
Bioinformatics & Genomics
Skill Description
biopython Molecular biology toolkit: sequences, parsing, NCBI access.
bioservices Unified interface to 40+ bioinformatics services.
gget Fast CLI/Python queries to 20+ bioinformatics databases.
pysam Read/write SAM/BAM/CRAM/VCF/FASTA for NGS pipelines.
scanpy Standard single-cell RNA-seq analysis pipeline.
anndata Annotated matrix data structure for single-cell.
scvi-tools Deep generative models for single-cell omics.
scvelo RNA velocity analysis for single-cell trajectories.
cellxgene-census Query CZ CELLxGENE Census for single-cell data.
bulk-rnaseq End-to-end bulk RNA-seq orchestration (FASTQ to DEG).
pydeseq2 Differential gene expression for bulk RNA-seq.
pathway-enrichment Pathway/gene-set enrichment analysis (ORA/GSEA).
arboreto Infer gene regulatory networks (GRNBoost2, GENIE3).
geniml ML on genomic interval data (region embeddings, scATAC).
gtars High-performance genomic interval analysis (Rust).
polars-bio Genomic interval ops and bioinformatics I/O on Polars.
deeptools NGS analysis: bigWig, QC, heatmaps for ChIP/RNA/ATAC-seq.
pyopenms Mass spectrometry / proteomics analysis platform.
matchms Spectral similarity and compound ID for metabolomics.
flowio Parse FCS flow cytometry files.
scikit-bio Microbiome analysis: alignments, diversity, ordination.
phylogenetics Build/analyze phylogenetic trees (MAFFT, IQ-TREE, FastTree).
etetoolkit Phylogenetic tree manipulation and visualization (ETE).
cobrapy Constraint-based metabolic modeling (FBA/FVA).
esm ESM3/ESMC protein models and ESMFold folding.
glycoengineering Analyze/engineer protein glycosylation.
tiledbvcf Scalable genomic variant storage/query with TileDB.
lamindb Lineage-native lakehouse for biological datasets/models.
depmap Cancer Dependency Map gene/drug dependency queries.
primekg Query the Precision Medicine Knowledge Graph.
nextflow Build/run Nextflow and nf-core bioinformatics pipelines.
pacsomatic Operate nf-core/pacsomatic tumor-normal workflows.
Cheminformatics & Drug Discovery
Skill Description
rdkit Cheminformatics toolkit for fine-grained molecular control.
datamol Pythonic RDKit wrapper for standard drug discovery.
deepchem Molecular ML with featurizers and MoleculeNet datasets.
torchdrug PyTorch GNNs for molecules and proteins.
molfeat Molecular featurization for ML (100+ featurizers).
medchem Medicinal chemistry filters and compound triage.
pytdc Therapeutics Data Commons AI-ready drug datasets.
diffdock DiffDock molecular docking and pose prediction.
molecular-dynamics MD simulations with OpenMM and MDAnalysis.
rowan Cloud-native molecular modeling workflow platform.
Physics, Astronomy, Materials, Quantum & Geospatial
Skill Description
astropy Astronomy/astrophysics workflows with Astropy.
pymatgen Materials science: structures, phase diagrams, band structure.
fluidsim Computational fluid dynamics simulations.
qiskit IBM quantum computing framework.
cirq Google quantum computing framework.
pennylane Hardware-agnostic quantum ML with autodiff.
qutip Open quantum systems simulation.
zarr-python Chunked N-D arrays for cloud storage.
geomaster Remote sensing, GIS, and spatial ML.
geopandas Geospatial vector data analysis.
Clinical, Medical & Healthcare
Skill Description
pydicom Read/write/anonymize DICOM medical imaging files.
pyhealth Clinical/healthcare deep-learning pipelines.
neurokit2 Biosignal processing (ECG, EEG, EDA, PPG, EMG).
neuropixels-analysis Neuropixels extracellular recording analysis.
clinical-decision-support CDS documents: cohort analyses and treatment reports.
clinical-reports Case/diagnostic/trial reports (CARE, ICH-E3, SOAP).
treatment-plans Focused medical treatment plans in LaTeX/PDF.
iso-13485-certification ISO 13485 medical device QMS documentation.
imaging-data-commons Query/download NCI Imaging Data Commons.
histolab WSI tile extraction and preprocessing.
pathml Full-featured computational pathology toolkit.
bids Brain Imaging Data Structure (BIDS) tooling.
Lab Automation & Platform Integrations
Skill Description
opentrons-integration Opentrons OT-2/Flex protocol API.
pylabrobot Vendor-agnostic lab automation framework.
ginkgo-cloud-lab Submit/manage protocols on Ginkgo Bioworks Cloud Lab.
benchling-integration Benchling SDK/API for registry, inventory, and ELN.
labarchive-integration LabArchives electronic lab notebook API.
protocolsio-integration protocols.io API for scientific protocol management.
omero-integration OMERO microscopy data management platform.
dnanexus-integration DNAnexus cloud genomics platform.
latchbio-integration Latch bioinformatics workflow platform.
adaptyv Adaptyv Bio Foundry API for protein experiments.

⚙️ Settings

The settings/ directory contains platform-specific Claude Code configuration files:

File Platform Status Line Script
settings-bash.json Linux / macOS ~/.claude/statusline.sh
settings-powershell.json Windows powershell … statusline.ps1 (username injected at install time)
settings.json Generic fallback ~/.claude/statusline.sh

All three files share the same base configuration and include a hooks.PreToolUse section that wires the two pre-tool-use hooks (see Hooks below).

env — environment variables that tune the Claude Code harness:

Variable Value What it does
CLAUDE_AUTOCOMPACT_PCT_OVERRIDE 70 Triggers automatic context compaction once the context window reaches 70% usage (instead of the higher default), keeping more room before the limit.
BASH_MAX_OUTPUT_LENGTH 20000 Maximum number of characters captured from a Bash command's output before it is truncated. Raised so long command outputs aren't cut short.
MAX_MCP_OUTPUT_TOKENS 8000 Caps the number of tokens returned by MCP (Model Context Protocol) tool calls, preventing a single MCP response from flooding the context.
CLAUDE_CODE_EFFORT_LEVEL medium Sets the default reasoning/effort level Claude applies to tasks (low / medium / high), balancing speed against thoroughness.

Other keys:

  • permissions.deny — read guardrails that block sensitive/noisy paths (./secrets/**, node_modules, build/dist/coverage/.next, logs, *.log).
  • statusLine — runs the platform-specific status line script (model, dir, git branch, context bar, cost, rate limits).
  • themedark.
  • modelsonnet.

Adjust model, theme, and the permission lists to match your own environment before relying on them.

A settings.local.json (machine-local permission overrides) is intentionally not tracked in this repo — it is git-ignored. Create your own at ~/.claude/settings.local.json if you need per-machine permission allowlists.


🪝 Hooks

The hooks/ directory contains Node.js scripts that Claude Code executes automatically at defined lifecycle events. Only the pre-tool-use hooks are wired into settings.json — the others (post-tool-use, notification) must be added manually if you want them.

Requirement: Node.js ≥ 18 must be on your PATH. The hooks use only built-in Node.js modules (fs, path, child_process) — no npm install needed.

Pre-Tool-Use hooks (active by default)

These run before Claude executes a tool call and can block the action entirely.

Hook Matcher What it blocks
block-dangerous-commands.js Bash Catastrophic shell commands: rm -rf ~, dd to disk, fork bombs, force-push to main, git reset --hard, chmod 777, env dumps, and more. Configurable via SAFETY_LEVEL (critical / high / strict).
protect-secrets.js Read|Edit|Write|Bash Access to sensitive files (.env, SSH keys, AWS/GCP/Azure credentials, keystores, .netrc, .npmrc, etc.) and bash commands that expose or exfiltrate secrets. Same SAFETY_LEVEL knob.

Post-Tool-Use hooks (optional)

Run after a tool call succeeds. Not wired into settings.json by default.

Hook Matcher What it does
auto-stage.js Edit|Write Automatically runs git add <file> after every file edit so git status always reflects exactly what Claude changed.

Notification hooks (optional)

Run when Claude Code fires a notification event (permission prompts, idle, MCP dialogs). Not wired into settings.json by default.

Hook What it does
notify-permission.js Sends a Slack message when Claude needs user input. Set CCH_SLA_WEBHOOK to your Slack Incoming Webhook URL.

Hook logs

All hooks write structured JSONL entries to ~/.claude/hooks-logs/YYYY-MM-DD.jsonl for audit and debugging.


📁 Repository Layout

claude-code-kit/
├── agents/      # 133 subagent .md definitions (+ CLAUDE.md, AGENTS-REFERENCE.md)
├── skills/      # 197 skill directories, each with a SKILL.md
├── hooks/
│   ├── pre-tool-use/   # block-dangerous-commands.js, protect-secrets.js
│   ├── post-tool-use/  # auto-stage.js
│   └── notification/   # notify-permission.js
├── settings/    # settings.json (global config)
└── README.md

Yorumlar (0)

Sonuc bulunamadi